Selected Reference List

(Selected Publications Since 1995)

Full Publication List

Total Cites for 5 most cited publications (through 2003):  > 4,500.

Currently submitted:  2 journal publications

Currently in preparation:  20 journal publications


Published:

The Ordered Local Domain Structures Of Decane- And Dodecaneselenol On Au{111},  J.D. Monnell, J.J. Stapleton, J.M. Tour, D.L. Allara and P.S. Weiss;  J.Phys.Chem.B, 2004, 108, 9834-9841

Optical Characterization of Oligo(phenylene-ethynylene) Molecular Electronic Switch Monolayers on Gold, L.J. Richter, C. S.-C. Yang, P.T. Wilson, C.A. Hacker, R.D. van Zee, J.J. Stapleton, D.L. Allara and J.M. Tour, J.Phys.Chem.B, 2004, 108; 12547-12559

Temperature effects on conduction through a molecular junction, Y. Selzer, M.A. Cabassi, T.S. Mayer, D.L. Allara, Nanotechnology, 2004, 15, S483–S488

Hydrogen-Bonding Directed Layer-by-Layer Assembly of Conjugated Polymers, Z. Liang, O. M. Cabarcos, D.L. Allara and Q. Wang; Adv.Mater., 2004, 16, 823-827

 The Interaction of Vapor-Deposited Ti and Au with Molecular Wires, A.V. Walker, T.B. Tighe, J. Stapleton, B.C. Haynie, S. Upilli, D.L. Allara, N. Winograd,  Appl.Phys.Lett., 2004, 84, 4008

Nanowire-Based Molecular Monolayer Junctions: Synthesis, Assembly, and Electrical Characterization, L.T. Cai, H. Skulason, J.B. Mattzela, J.G. Kushmerick, S.K. Pollack, J. Naciri, R. Shashidhar, T.E. Mallouk, D.L. Allara and T. S. Mayer,  J.Phys.Chem. B, 2004, 108, 2827-2832

The Dynamics of Noble Metal Penetration Through Methoxy-Terminated Organic Monolayers, A.V. Walker, T.B. Tighe, O. Cabarcos, M.D. Reinard, S. Uppili, B.C. Haynie, N. Winograd and D. L. Allara,  JACS, 2004, 126, 3954-3963

Thermally Activated Conduction in Molecular Junctions, Y. Selzer, M.A. Cabassi, T.S. Mayer, and D.L. Allara, JACS, 2004, 126, 4052-4053

Ultrasensitive quartz Crystal Microbalance with Porous Gold Electrodes, M. Hiedaa, R. Garcia, M. Dixon, T. Daniel, D. Allara, and M. Chan,  Appl.Phys. Lett, 2004, 84, 628

Direct Covalent Grafting of Conjugated Molecules onto Si, GaAs, and Pd Surfaces from Aryldiazonium Salts, M.P. Stewart, F. Maya, D.V. Kosynkin, S.M. Dirk, J.J. Stapleton, C.M. McGuiness, D. Allara, J.M. Tour, JACS, 2004, 126, 370-378

Self-assembled monolayers of nitrile-functionalized alkanethiols on gold and silver substrates, S. Frey, A. Shaporenko, M. Zharnikov, P. Harder and D. L. Allara, J.Phys.Chem.B. 2003, 107, 7716-7725

Chemical and Structural Aspects of Self-Assembled Oligo-phenylene-ethynlyene Molecular Electronic Switch Monolayers on Gold, J.J. Stapleton, P. Harder, T.A. Daniel, M. Reinard, H. Skulason, Y. Yao, D.W. Price, J. M. Tour, and D. L. Allara, Langmuir,  2003, 19, 8245

Nucleation and Growth of Calcium Phosphate onto Self-Assembled Templates by a Solution-Formed Critical Nucleus Mechanism: Physiological Solutions, B.J. Tarasevich, C.C. Chusuei, D.L. Allara, J.Phys.Chem.B., 2003; 107; 10367-10377

Solvation of Zero-Valent Metals in Organic Thin Films, A.V. Walker, T.B. Tighe, M.D. Reinard, B.C. Haynie, D.L. Allara, N. Winograd, Chem Phys. Lett, 2003, 369, 615-620

Entangled Spin States in in Self_Assembled Monolayer Systems, G.P. Berman, V.I. Tsifrinovich, D.L. Allara, Phys.Rev.B, 2002, 66, 193406

Bond Insertion, Complexation and Penetration Pathways of Vapor-Deposited Aluminum Atoms with HO- and CH3O-Terminated Organic Monolayers, G.L. Fisher, A.V. Walker, A.E. Hooper, T.B. Tighe, K.B. Bahnck, H.T. Skriba, M.D. Reinard, B.C Haynie, R.L. Opila, N. Winograd and D.L. Allara, JACS, 2002, 124, 5528-5541

Single Molecular Switches, Z.J. Donhauser, B.A. Mantooth, K.F. Kelly, L.A. Bumm, J.D. Monnell, J. J. Stapleton, D.L. Allara, J.M. Tour, and P.S. Weiss; Science, 292, 2303-2307(2001)

G.L. Fisher, A.E. Hooper, R.L. Opila, D.L. Allara and N. Winograd, The Interaction of Vapor-Deposited Al Atoms with -CO2H Groups at The Surface of a Self-Assembled Alkanethiolate Monolayer on Gold, J.Phys.Chem. B., 104, 3267-3273(2000)


T.D. Dunbar, M.T. Cygan, L.A. Bumm, G.S. McCarty, T.P. Burgin, W.A. Reinerth, L. Jones II, J. J. Jackiw, J.M. Tour, P.S. Weiss and D.L. Allara, Combined Scanning Tunneling Microscopy and Infrared Vibrational Spectroscopic Probes of Surface Assemblies of Fully Conjugated Molecules and Oligomers, J.Phys.Chem, B., 104, 4880-4893(2000)

L.A. Bumm, J.J. Arnold, L.F. Charles, T.D. Dunbar, D.L. Allara and P.S. Weiss, Directed Self-Assembly to Create Molecular Terraces with Molecularly Sharp Boundaries in Organic Monolayers, J.Am.Chem.Soc., 121, 8017-8021(1999)

L.A. Bumm, J.J. Arnold, T.D. Dunbar, D.L. Allara and P.S. Weiss, Electron Transport through Organic Molecules, J.Phys.Chem. B., 83, 8122-8127(1999)

K. Heister, D.L. Allara, K. Bahnck, S. Frey, M. Zharnikov, and M. Grunze, Deviations from 1:1 Compositions in Self-Assembled Monolayers Formed from Asymmetric Dialkyl Disulfides, Langmuir, 15, 5440-5443(1999)

A. Hooper, G.L. Fisher, K. Konstadinidis, D. Jung, H. Nyugen, R. Opila, R.W. Collins, N. Winograd, and D.L. Allara, Chemical Effects of Methyl and Methyl Ester Surface Groups on the Nucleation and Growth of Vapor-Deposited Aluminum Films, J.Am.Chem.Soc., 121, 8052-8064(1999)

G.L. Fisher, A. Hooper, R.O. Opila, D.R. Jung, D.L. Allara and N. Winograd, The Interaction between Vapor-Deposited Al Atoms and Methylester-terminated Self-Assembled Monolayers Studied by TOF-SIMS, XPS and IRS, J. Electron Spectrosc. and Related Phenomena, 98-99, 139-148(1999)

K. Seshadri, A. Guiseppi-Elie and D.L. Allara, Towards Controlled Area Electrode Assemblies: Selective Blocking of Gold Electrode Defects with Polymethylene Nanocrystals, Langmuir, 15; 742-749(1999)


G. D. Hietpas, J.M. Sands, and D.L. Allara, A Vibrational Spectroscopic Study of Molecular Restructuring at Surfaces of Unidirectionally Rubbed Polyimide Thin Films, J.Phys.Chem. B., 102, 10556-10567(1998)

G.D. Hietpas, J.M. Sands, and D.L. Allara, Formation of A Molecularly Reconstructed Surface Layer during Unidirectional Rubbing of Polyimide Films, Macromolecules, 31, 3374-3378(1998)

P.S. Weiss, L.A. Bumm, T.D. Dunbar, T.P. Burgin, J.M. Tour and D.L. Allara, Probing Electronic Properties of Conjugated and Saturated Molecules in Self-Assembled Monolayers, Annals of the New York Academy of Sciences, 852, 145-168 (1998)

D.L. Allara, T.D. Dunbar, P.S. Weiss, L.A. Bumm, M.T. Cygan, J.M.Tour, T.P. Burgin and L. Jones, II, Evolution of Strategies for Self-Assembly And Hookup of Molecule-Based Devices, Annals of the New York Academy of Sciences, 852, 349-370 (1998)

M.T. Cygan, T.D. Dunbar, J.J. Arnold, L.A. Bumm, N.F. Shedlock, T.P. Burgin, L. Jones II, D.L. Allara, J.M. Tour and P.S. Weiss, Insertion, Conductivity and Structures of Conjugated Organic Oligomers in Self-Assembled Alkanethiol Monolayers on Au{111}, J.Am.Chem.Soc, 120, 2721-2732(1998)

G.D. Hietpas and D.L. Allara, The Molecular Structure of Poly(biphenyl dianhydride-p-phenylenediamine) Polyimide Thin Films by Infrared Spectroscopy. 1. Thickness Dependence of Structure in The Nano- to Micrometer Range, J.Poly.Sci., Phys. Ed., 36, 1247-1260(1998)


P.S. weiss, H. Yokota, R. Aebersold, G. van den Engh, L.A. Bumm, J.J. Arnold, T.D. Dunbar and D.L. Allara, Creating, Tailoring and Using One-Dimensional Interfaces in Two-Dimensional Films, J.Physics: Condensed Matter, J.Physics: Condens. Matter, 10, 1-10(1998)


N. Kacker, S.K. Kumar and D.L. Allara, Wetting-Induced Reconstruction in Molecular Surfaces, Langmuir, 13, 6366-6369(1997)

Y-T. Tao, W-L. Lin, G.D. Hietpas and D.L. Allara, An Infrared Spectroscopic Study of Chemically-Induced Dewetting in Liquid Crystalline Types of Self-Assembled Monolayers, J.Phys.Chem. B, 101, 9732-9740(1997)

D. W. Carr, M. J. Lercel, C. S. Whelan, H. G. Craighead, K. Seshadri, and D. L. Allara, High-selectivity pattern transfer processes for self-assembled monolayer electron beam resists, J.Vac.Sci.Technol.A. 15, 1446-1450, 1997.

I. Engquist, I. Lundstrom, B. Liedberg, A. N. Parikh, and D. L. Allara, Infrared characterization of amorphous and polycrystalline D2O ice on controlled wettability self-assembled alkanethiolate monolayers, J.Chem.Phys. 106 , 3038-3048, 1997.

A. N. Parikh, M. A. Schivley, E. Koo, K. Seshadri, D. Aurentz, K. Mueller, and D. L. Allara, n-Alkylsiloxanes: From single monolayers to layered crystals. The formation of crystalline polymers from the hydrolysis of n- octadecyltrichlorosilane, J.Am.Chem.Soc, 119, 3135-3143(1997).

C. D. Tidwell, S. I. Ertel, B. D. Ratner, B. J. Tarasevich, S. Atre, and D. L. Allara, Endothelial cell growth and protein adsorption on terminally functionalized, self-assembled monolayers of alkanethiolates on gold, Langmuir, 13 3404-3413(1997).

L. A. Bumm, J. J. Arnold, M. T. Cygan, T. D. Dunbar, T. P. Burgin, L. Jones, D. L. Allara, J. M. Tour, and P. S. Weiss, Are single molecular wires conducting? Science, 271, 1705-1707(1996).

M. J. Lercel, C. S. Whelan, H. G. Craighead, K. Seshadri, and D. L. Allara, High-resolution silicon patterning with self-assembled monolayer resists, J.Vac.Sci.Technol.B. 14, 4085-4090(1996).

M. J. Lercel, H. G. Craighead, A. N. Parikh, K. Seshadri, and D. L. Allara, Sub-10 nm lithography with self-assembled monolayers, Appl Phys Lett 68, 1504-1506(1996).

M. J. Lercel, H. G. Craighead, A. N. Parikh, K. Seshadri, and D. L. Allara, Plasma etching with self-assembled monolayer masks for nanostructure fabrication, J.Vac.Sci.Technol.A. 14, 1844-1849(1996).

K. Seshadri, K. Froyd, A. N. Parikh, D. L. Allara, M. J. Lercel, and H. G. Craighead. Electron-beam-induced damage in self-assembled monolayers, J.Phys.Chem. 100, 15900-15909(1996).

S. J. Stranick, S. V. Atre, A. N. Parikh, M. C. Wood, D. L. Allara, N. Winograd, and P. S. Weiss, Nanometer-scale phase separation in mixed composition self- assembled monolayers, Nanotechnol. 7, 438-442(1996).

Y. T. Tao, G. D. Hietpas, and D. L. Allara, HCl vapor-induced structural rearrangements of n-alkanoate self- assembled monolayers on ambient silver, copper, and aluminum surfaces, J.Am.Chem.Soc 118, 6724-6735(1996).

C. S. Whelan, M. J. Lercel, H. G. Craighead, K. Seshadri, and D. L. Allara, Improved electron-beam patterning of Si with self-assembled monolayers, Appl.Phys.Lett. 69, 4245-4247(1996).

D. L. Allara, A. N. Parikh, and F. Rondelez, Evidence for a unique chain organization in long chain silane monolayers deposited on two widely different solid substrates, Langmuir 11, 2357-2360(1995).

S. V. Atre, B. Liedberg, and D. L. Allara, Chain length dependence of the structure and wetting properties in binary composition monolayers of OH- and CH3- terminated alkanethiolates on gold, Langmuir 11, 3882-3893(1995).

K. Konstadinidis, P. Zhang, R. L. Opila, and D. L. Allara, An in-situ X-ray photoelectron study of the interaction between vapor-deposited Ti atoms and functional groups at the surfaces of self-assembled monolayers, Surface.Sci. 338, 300-312(1995).

M. J. Lercel, M. Rooks, R. C. Tiberio, H. G. Craighead, C. W. Sheen, A. N. Parikh, and D. L. Allara, Pattern transfer of electron beam modified self-assembled monolayers for high-resolution lithography, J.Vac.Sci.Technol.B. 13, 1139-1143(1995).

A. N. Parikh, B. Liedberg, S. V. Atre, M. Ho, and D. L. Allara, Correlation of molecular organization and substrate wettability in the self-assembly of n-alkylsiloxane monolayers, J.Phys.Chem. 99, 9996-10008(1995).

J. Shi, B. Hong, A. N. Parikh, R. W. Collins, and D. L. Allara, Optical characterization of electronic transitions arising from the Au/S interface of self-assembled n-alkanethiolate monolayers, Chem.Phys.Lett. 246, 90-94(1995).

J. M. Tour, L. Jones, D. L. Pearson, J. J. S. Lamba, T. P. Burgin, G. M. Whitesides, D. L. Allara, A. N. Parikh, and S. V. Atre, Self-assembled monolayers and multilayers of conjugated thiols, alpha,omega-dithiols, and thioacetyl-containing adsorbates. Understanding attachments between potential molecular wires and gold surfaces, J.Am.Chem.Soc 117, 9529-9534(1995).

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